DTI quality control assessment via error estimation from Monte Carlo simulations

نویسندگان

  • Mahshid Farzinfar
  • Yin Li
  • Audrey R. Verde
  • Ipek Oguz
  • Guido Gerig
  • Martin A. Styner
چکیده

Diffusion Tensor Imaging (DTI) is currently the state of the art method for characterizing microscopic tissue structure in the white matter in normal or diseased brain in vivo. DTI is estimated from a series of Diffusion Weighted Imaging (DWI) volumes. DWIs suffer from a number of artifacts which mandate stringent Quality Control (QC) schemes to eliminate lower quality images for optimal tensor estimation. Conventionally, QC procedures exclude artifact-affected DWIs from subsequent computations leading to a cleaned, reduced set of DWIs, called DWI-QC. Often, a rejection threshold is heuristically/empirically chosen above which the entire DWI-QC data is rendered unacceptable and thus no DTI is computed. In this work, we have devised a more sophisticated, Monte-Carlo simulation based method for the assessment of resulting tensor properties. This allows for a consistent, error-based threshold definition in order to reject/accept the DWI-QC data. Specifically, we propose the estimation of two error metrics related to directional distribution bias of Fractional Anisotropy (FA) and the Principal Direction (PD). The bias is modeled from the DWI-QC gradient information and a Rician noise model incorporating the loss of signal due to the DWI exclusions. Our simulations further show that the estimated bias can be substantially different with respect to magnitude and directional distribution depending on the degree of spatial clustering of the excluded DWIs. Thus, determination of diffusion properties with minimal error requires an evenly distributed sampling of the gradient directions before and after QC.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Estimation for the Type-II Extreme Value Distribution Based on Progressive Type-II Censoring

In this paper, we discuss the statistical inference on the unknown parameters and reliability function of type-II extreme value (EVII) distribution when the observed data are progressively type-II censored. By applying EM algorithm, we obtain maximum likelihood estimates (MLEs). We also suggest approximate maximum likelihood estimators (AMLEs), which have explicit expressions. We provide Bayes ...

متن کامل

Numerical error estimation in Random Noise coupled plasma edge simulations in nuclear fusion reactors

The plasma edge in nuclear fusion reactors is simulated using a coupled finite volume / Monte Carlo code. To unravel error contributions from such coupled simulation technique, a framework for error assessment has been developed. It was successfully applied to Random Noise simulations, where the trajectories in the Monte Carlo code are completely uncorrelated each iteration. However, difficulti...

متن کامل

Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Error Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Representations

This preprint is made available because the published work cited below had several infelicities due to production error, i.e., awkward layout of equations and font styles. The conversion from the Words document here to IEEE TMI format was a mess. Abstract An analytical framework of error propagation for diffusion tensor imaging (DTI) is presented. Using this framework, any uncertainty of intere...

متن کامل

Analytic Expressions for the Uncertainty of DTI-derived Parameters and their Validation Using Monte Carlo Methods

Introduction: Monte Carlo (1) and Bootstrap (2) methods provide powerful statistical tools for determining the effects of background noise in diffusion weighted imaging (DWI) data on DTI-derived parameters, and for optimizing the design of DTI experiments. While these empirical methods do not provide analytical relationships between the variance of the distribution of noise in the DWI data and ...

متن کامل

Optimum Monte Carlo Simulations: Some Exact Results

Abstract. We obtain exact results for the acceptance ratio and mean squared displacement in Monte Carlo simulations of the simple harmonic oscillator in D dimensions. When the trial displacement is made uniformly in the radius, we demonstrate that the results are independent of the dimensionality of the space. We also study the dynamics of the process via a spectral analysis and we obtain an ac...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • Proceedings of SPIE--the International Society for Optical Engineering

دوره 8669  شماره 

صفحات  -

تاریخ انتشار 2013